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Theses from 2025

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A clustering approach to the study of actinobacteriophage synteny and mosaicism, Madison Bendele

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Microbial community contribution to oxidative stress defense in high-biomass forming cyanobacteria harmful algal blooms (cHABs), Chelsea Donovan

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Microbial biodiversity of the James River rock pool ecosystem., Jordan C. Heydt and Jordan Cynthia Heydt

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The influence of intrinsic foot muscles in modulating foot shape relative to substrate and the efficacy of different strengthening approaches, Luke R. Lotsis

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Characterizing the Mcoln1-/- mouse as a model of early Age-related Macular Degeneration, Jonathan G. Miller

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Movement-evoked responses contribute to co-contraction in the rat tail during the nociceptive withdrawal response, Emily G. Myers

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Experimentally testing a mechanism of urban adaptation: Are wild catbirds able to immediately adjust their song in response to urban noise?, Eriberto Osorio

Theses from 2024

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Characterizing the expression of the Sphingosine 1-phosphate pathway in injury and post-traumatic fibrosis, Nicole Cubbage

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Assessing structural variation in and out of the classroom: Characterizing structural variation within Campanula americana and effects of long read sequencing on students learning, Tyler Gandee

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The effects of tree shelters on tree seedling growth, microclimate, and seedling chlorophyll fluorescence: Two-year results, Christina Henriksen

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The ecology and genetic diversity of Buckleya distichophylla (Santalaceae), Montana Hill

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Greening the edge: Investigating riparian buffer restorations in a pastoral setting and their effects on soil carbon and microbial community composition., Seth McCullough

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Dynamics of skin-based gene expression in red-sided garter snakes (Thamnophis sirtalis parietalis): sex and seasonal influences, Emily C. Plant

Theses from 2023

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Characterizing the effects of light on the early onset photoreceptor function loss in Mucolipidosis type IV, Rebecca Cistulli

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Microglia refine early multisensory circuits in the lateral cortex of the inferior colliculus in a complement-dependent manner, Shaida Hamidi

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Locomotion and life history in a leaping primate: Mechanics and energetics of movement throughout the Propithecus lifespan, Nicholas Heslep

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Understanding the regulatory context and mechanism of HLH-25 mediated transcriptional repression, Dagmawi Mamo

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Effects of litter biomass and soil stoichiometry on leaf litter amphibian and reptile density, biomass, and community structure in tropical wet forests, Alondra Medina Charriez

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The response of Microcystis and the microbiome to exogenous hydrogen peroxide, Bryan A. Puma

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Understanding context dependent responses to climate change in Arizona Tiger Salamanders (Ambystoma mavortium nebulosum), Kentrell Richardson

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Pasturelands as natural climate solutions: a socioecological study of tree carbon and beef production trade-offs, Bela Starinchak

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Energy homeostasis in an extreme vertebrate: Relationships between life-history status and the molecular stress response in red-sided garter snakes, Rysa Thomas

Theses from 2022

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The impact of IAA and tryptophan on Microcystis bloom community dynamics, Hunter R. Baylous

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Assessing red spruce (Picea rubens) restoration potential under current and future predicted climate change in Virginia, Christian Brown

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Urban habitats impact the song and reproductive success of a migratory bird, the gray catbird (Dumetella carolinensis), Sasha Ewing

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Pilfering passerines? Inter-Class competition: A new direction in foraging ecology, Shannon Gillen

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A dual-function gene in Zea mays that encodes two β-amylase proteins with different cellular locations and functions, Kenan Ozcan

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Identifying key stream restoration variables in an agriculturally impaired Chesapeake Bay watershed, Julia Portmann

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Urbanization drives changes in avian communities, which are reflected in the song of a vocal mimic, Jaclyn Tolchin

Theses from 2021

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Plant-pollinator network dynamics of the Little Fork Shale Barren, Sarah N. Brown

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Is immediate flexibility present in a vocal mimic, the gray catbird (Dumetella carolinensis), across an urban gradient?, Shannon K. Eppert

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Comparing the effect of four propagation techniques on hybrid chestnut seedling quality, Taylor Evans

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A stable-isotope probing approach to modeling bidirectional nutrient exchange in the Microcystis phycosphere, Malia Gardner

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Ecophysiology of toxic bloom-forming cyanobacteria and their symbionts, Dominique J. Lockwood

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Identifying the molecular pathways that drive retinal degeneration in the childhood neurodegenerative disease: Mucolipidosis Type IV, Michael Pamonag

Theses from 2020

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Research and development of a computational simulation of a rat tail, Abed Adawi

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Population status, threats, and conservation of Preuss's red colobus (Piliocolobus preussi) and other diurnal primates in the Ndokbou forest, Littoral Region, Cameroon, Ruth Bowers-Sword

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Microglia and fractalkine involvement in shaping multimodal midbrain circuitry, Cooper A. Brett

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Modeling species distribution and habitat suitability of American ginseng (Panax quinquefolius) in Virginia, Jacob D. J. Peters

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Isolation, enumeration and antibiotic profiling of Vibrio vulnificus and V. parahaemolyticus from coastal Virginia, Stanley E. Peyton Jr.

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Determining the impacts of urbanization on song structure and its function in territorial defense for gray catbirds (Dumetella carolinensis), Morgan L. Rhodes

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Splitting up a complex mess: The effectiveness of statistical analysis on delimiting species complexes, Sara N. Schoen

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Antibacterial properties of novel amphiphiles, Ariana Simeone

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Habitat utilization and impact of flooding on James spinymussel (Parvaspina collina) populations in Virginia streams, Christine A. Verdream

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Do Innexins function in the extreme cold response of Drosophila melanogaster, Madison A. Ward

Theses/Dissertations from 2019

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Urban stream restoration: An evaluation of material processing and conveyance channels, Madeline Berg

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Forest structure of long-term conserved areas utilizing different strategies on a continental, glacial moraine formed island, Christopher Coggin

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Reproductive character displacement in Calopteryx aequabilis and C. maculata: Improving species recognition through the divergence of male mating preferences, Melissa Encinias

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Assessing the prevalence of multidrug resistant Salmonella enterica from stream sediment and poultry litter in the Shenandoah Valley of Virginia, Noah Greenman

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The Microcystis microbiome: Interactions with heterotrophic bacteria in the Microcystis phycosphere, Alexa Hoke

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Herpetological assemblages in tropical dry forests of the Azuero Peninsula, Panama: An evaluation of reforestation, Tyler Kovacs

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Examining the effect of interstitial space on Eastern oysters (Crassostrea virginica): applications of photogrammetry and three-dimensional modeling, Bailie Lavan

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In vitro propagation of a critically endangered African violets (Saintpaulia rupicola B.L. Burtt), Thomas W. Lowry III

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Assessing populations of eastern brook trout (Salvelinus fontinalis) above and below waterfalls in mountain streams of Virginia, Hannah Eisemann Macmillan

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ANTI-CRISPR vs. CRISPR: The evolutionary arms race between microorganisms, Rachael M. St. Jacques

Theses/Dissertations from 2018

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Efficacy of magnesium enriched artificial substrate for oyster restoration, Matthew Elder

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Potential benefits of restored Riparian Zones in an agricultural matrix for bat communities, Matthew T. Harris

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Isolation, sequencing, and characterization of four transmissible antibiotic resistance plasmids captured from bacteria in stream sediments, Curtis J. Kapsak

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Exploring the microbiome: diversity of the microbial community of three foam nesting frogs, Genus: Polypedates, across a developmental gradient, Sarah McGrath

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The combined effects of soil fertility and soil amendments on the growth and mycorrhizal associations of American Ginseng (Panax quinquefolius), Emily Ann Murray

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Investigating interspecific and intraspecific variation in lung development in amphibians, Courtney Neumeyer

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Characterizing epigenetic regulation in the developing chicken retina, Bejan Abbas Rasoul

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Antimicrobial activity, biofilm disruption capabilities, and synergistic interactions of novel amphiphiles, Stephanie Sharpes

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Competition and Predation: Interactions between American eels (Anguilla rostrata) and brook trout (Salvelinus fontinalis) in Virginia mountain streams, Jonathan Studio

Theses/Dissertations from 2017

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Female color variation and male harassment in the polymorphic damselfly Megalagrion calliphya, Phoebe Cook

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Revealing the current relationship between stream acidification and fish species richness: What is the status after two decades of recovery?, Patrick A. Harmon

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The effect of cattle management on soil carbon: Implications for climate change, Kelly M. Livernoche

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The effect of calcium in artificial substrates for oyster restoration: Implications for the mitigation of oyster population decline, Jessie Mandirola

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The effect of ambient temperature on recovery of surgical stress in Sprague-Dawley rats, Romie D. Powell

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Impact of Burkholderia phytofirmans strain PsJN on the ex vitro acclimatization and in vitro propagation of tissue cultured Dionaea muscipula (Venus fly trap), Peter L. Riley

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The antimicrobial and biofilm disruption activity of novel amphiphiles, Elizabeth A. Rogers

Theses/Dissertations from 2016

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Variation in female mating behavior and success in the damselfly, Calopteryx maculata, Suzanne E. Allison

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Vertical movement of the endangered James spinymussel (Pleurobema collina) and the notched rainbow mussel (Villosa constricta) in response to floods at different temperatures and substrates: Implications for conservation and management, Dorottya Boisen

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Using morphometrics to evaluate taxonomic relationships in Eleocharis tenuis (Cyperaceae), Lane D. Gibbons

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The effect of stimulus location and initial posture on the kinematics of the nociceptive withdrawal reflex of the tail in intact and unanaesthetized rats, Yulhea Kim

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Next-generation sequencing of a multi-drug resistance plasmid captured from stream sediment, Kevin G. Libuit

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Occurrence, antibiotic resistance, and survival of fecal enterococci in turkey litter, Steven Glynn McBride II

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The effect of water quality on the survival and fitness of brook trout (Salvelinus fontinalis) eggs, alevins and fry in aquaculture and deep springs along the South River in Waynesboro, VA, Thomas D. Teears

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Prioritizing eastern hemlock (Tsuga canadensis) for secondary imidacloprid treatment against the invasive hemlock woolly adelgid (Adelges tsugae) in Shenandoah National Park, Katelyn Walters

Theses/Dissertations from 2015

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The effect of controlled burns on abundance of woody species at Buck Mountain, West Virginia, Barry E. Edgar

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Using capture-mark-recapture techniques to estimate detection probabilities & fidelity of expression for the critically endangered James spinymussel (Pleurobema collina)., Alaina C. Esposito

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Comparison of the antibacterial, colloidal, and hemolytic properties of novel triple-headed, triscationic amphiphiles, Tara Gallagher

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Characterization of the C. elegans nascent polypeptide associated complex (NAC) function under stress, Jonathan E. Sandoval

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The evolutionary selective pressures exerted on A3 actinobacteriophages, Cheyenne Weeks-Galindo

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Identification of three novel genes, PPK12, PPK23, and PPK25, involved in noxious cold detection in Drosophila, Benjamin Williamson

Theses/Dissertations from 2014

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Interleukin-3-deficient mice have increased resistance to blood-stage malaria, Sarah Rebekah Auclair

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Characterization of Vibrio vulnificus strains using phenotypic and genotypic assays, James Conrad

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Colloidal and biological properties of triscationic amphiphiles with one or two tails, John N. Marafino

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Profile of the unfolded protein response in C. elegans depleted of the translational chaperone, NAC., Caylin S. Murray

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The role of ephrin-B3 on midbrain topography and auditory function, William Andrew Noftz

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The relationship between riparian zone width and floristic quality in Shenandoah County, Virginia, Jamie D. Smith

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Effects of fine sediment on juvenile brook trout habitat use and social interactions, Kyle Snow

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Exploration of genomic determinants for host range in phages of pathogenic and non-pathogenic mycobacteria, Anisa Christine Tracy

Theses/Dissertations from 2013

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Probiotic bioaugmentation of an anti-Bd bacteria, Janthinobacterium lividum, on the amphibian, Notophthalmus viridescens: Transmission efficacy and persistence of the probiotic on the host and non-target effects of probiotic addition on ecosystem components, Molly Bletz

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Occurrence, survival, and persistence of the fecal indicator bacterium, Enterococcus mundtii, in soils of a contaminated watershed, Marc Carpenter

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The potential for replication and transmission of antibiotic resistance plasmids in an E. coli population in agriculturally impacted stream sediment, Erika Gehr

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Microbial dynamics and core microbiome of red-backed salamanders (Plethodon cinereus), Andrew Howard Loudon

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A novel RCC1-like protein is a crucial regulator of the intraerythrocytic cycle of the human malaria parasite, Plasmodium falciparum., Marcus Davon Skaflen

Theses/Dissertations from 2012

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Food web subsidies in intermittent streams: Implications for small isolated populations of native brook trout, Jennifer Lauren Courtwright

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Lipophilic and hydrophilic quantitative analysis of antioxidant activity in tomatoes and tomato products, Anna Tran Dinh